STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_22_0940AAA domain-containing protein. (731 aa)    
Predicted Functional Partners:
LMJF_20_0650
rRNA biogenesis protein-like protein.
  
   0.536
LMJF_08_0280
Putative ribosomal protein L2.
  
 
 0.508
LMJF_35_0070
Prohibitin.
  
 0.496
LMJF_19_1290
PHB domain-containing protein.
  
 0.495
LMJF_19_1280
PHB domain-containing protein.
  
 0.495
LMJF_16_1610
Prohibitin.
  
 0.495
LMJF_05_1040
Stomatin-like protein.
  
 0.495
LMJF_11_0960
40S ribosomal protein S5A.
  
   0.486
LMJF_14_0780
Uncharacterized protein.
  
 
 0.474
LMJF_35_3370
Uncharacterized protein.
   
 
 0.467
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.