STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_22_0070Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
LMJF_08_0140
Putative DNA repair protein.
   
 0.999
LMJF_24_1520
SAP domain-containing protein.
   
 0.972
LMJF_25_1290
NPL4 domain-containing protein.
    
 0.952
LMJF_10_0850
Putative nuclear transport factor 2.
   
 0.939
LMJF_34_2340
Putative asparaginyl-tRNA synthetase.
   
 0.910
LMJF_29_0590
Putative DNA repair helicase.
     
 0.877
LMJF_32_3920
Putative DNA repair helicase.
     
 0.877
LMJF_24_2280
Putative DNA excision repair protein.
     
 0.820
RPL10a
Putative 60S ribosomal protein L10a.
     
 0.818
LMJF_24_1680
VWFA domain-containing protein.
   
 
 0.811
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.