STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_21_0060WD_REPEATS_REGION domain-containing protein. (424 aa)    
Predicted Functional Partners:
LMJF_12_0360
Uncharacterized protein.
   
 
 0.979
LMJF_35_3370
Uncharacterized protein.
   
 
 0.965
LMJF_15_0950
Putative 40S ribosomal protein S3.
   
 
 0.942
LMJF_28_1010
Putative ribosomal protein S20.
   
 
 0.939
LMJF_13_0570
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.937
LMJF_01_0410
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.934
LMJF_27_1380
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.934
LmjF36.5010
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.934
LMJF_36_0980
Putative 40S ribosomal protein S10.
   
 
 0.934
LMJF_03_0250
Putative ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.934
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.