STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_20_1530Cell division cycle protein-like protein. (881 aa)    
Predicted Functional Partners:
LMJF_16_0060
Putative peroxisome assembly protein.
   
0.951
LMJF_35_1420
Putative peroxisome targeting signal 1 receptor.
   
 0.835
LMJF_35_4960
Uncharacterized protein.
    
 0.827
PEX14
Putative peroxin 14.
    
 0.790
LMJF_19_1250
Putative peroxisome assembly protein.
    
 0.789
L1994.12
RING finger protein.
   
 0.777
LMJF_35_3260
Peroxin 19.
    
 0.677
PEX7
Putative peroxisomal targeting signal type 2 receptor.
     
 0.633
LMJF_25_1290
NPL4 domain-containing protein.
    
 0.607
LMJF_36_6490
Putative ubiquitin fusion degradation protein.
    
 0.602
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.