STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEAT1Mitochondrial editosome-like complex associated TUTase. (409 aa)    
Predicted Functional Partners:
LMJF_02_0410
Putative RNA-editing complex protein MP81.
    
 
 0.815
RET2
RET2, RNA editing complex MP57.
      
 0.810
REL2
Mitochondrial RNA ligase 2.
      
 0.810
kPAP2
Putative mitochondrial poly(A) polymerase 2.
      
 0.714
TUT3
Terminal uridylyltransferases 3.
      
 0.690
TUT4
RNA uridylyltransferase 4.
      
 0.657
LMJF_01_0590
Mitochondrial RNA editing ligase 1.
      
 0.614
LMJF_08_0900
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
      
 0.499
LMJF_17_1410
Putative zinc-finger protein ZPR1.
      
 0.495
REH2
RNA editing associated helicase 2,putativewith.
      
 0.491
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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