STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_15_0330Abhydrolase_3 domain-containing protein. (1022 aa)    
Predicted Functional Partners:
LMJF_35_0670
DRIM domain-containing protein.
   
 0.753
LMJF_01_0410
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.687
LMJF_35_3880
WD_REPEATS_REGION domain-containing protein.
   
  0.685
LMJF_34_0740
CBF domain-containing protein.
    
  0.684
LMJF_19_1210
PINc domain-containing protein.
    
  0.684
L374.02
Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.684
LMJF_30_3020
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.683
L6586.01
Conserved WD40 repeat domain protein.
   
  0.679
LMJF_28_0720
Sas10 domain-containing protein.
    
  0.678
LMJF_32_0150
Uncharacterized protein.
    
  0.659
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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