Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FEN1 | LMJF_07_1140 | Q4FYU7 | Q4QIH2 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Putative methionine-S-sulfoxide reductase. | 0.445 |
| FEN1 | LMJF_14_0260 | Q4FYU7 | Q4QFV9 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | VWFA domain-containing protein. | 0.849 |
| FEN1 | LMJF_23_1270 | Q4FYU7 | Q4QB25 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.892 |
| FEN1 | LMJF_27_1890 | Q4FYU7 | E9ADG7 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Putative endo/exonuclease Mre11. | 0.982 |
| FEN1 | LMJF_28_0530 | Q4FYU7 | Q4Q8L7 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | RAD50 DNA repair-like protein. | 0.954 |
| FEN1 | POLIA | Q4FYU7 | Q8IS90 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Putative mitochondrial DNA polymerase I protein A. | 0.542 |
| FEN1 | POLIB | Q4FYU7 | Q4QGE6 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Putative mitochondrial DNA polymerase I protein B. | 0.542 |
| LMJF_07_1140 | FEN1 | Q4QIH2 | Q4FYU7 | Putative methionine-S-sulfoxide reductase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.445 |
| LMJF_07_1140 | LMJF_23_1270 | Q4QIH2 | Q4QB25 | Putative methionine-S-sulfoxide reductase. | Uncharacterized protein. | 0.445 |
| LMJF_07_1140 | POLIA | Q4QIH2 | Q8IS90 | Putative methionine-S-sulfoxide reductase. | Putative mitochondrial DNA polymerase I protein A. | 0.470 |
| LMJF_07_1140 | POLIB | Q4QIH2 | Q4QGE6 | Putative methionine-S-sulfoxide reductase. | Putative mitochondrial DNA polymerase I protein B. | 0.470 |
| LMJF_14_0260 | FEN1 | Q4QFV9 | Q4FYU7 | VWFA domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.849 |
| LMJF_14_0260 | LMJF_23_1270 | Q4QFV9 | Q4QB25 | VWFA domain-containing protein. | Uncharacterized protein. | 0.719 |
| LMJF_14_0260 | LMJF_27_1890 | Q4QFV9 | E9ADG7 | VWFA domain-containing protein. | Putative endo/exonuclease Mre11. | 0.671 |
| LMJF_14_0260 | LMJF_28_0530 | Q4QFV9 | Q4Q8L7 | VWFA domain-containing protein. | RAD50 DNA repair-like protein. | 0.660 |
| LMJF_14_0260 | POLIA | Q4QFV9 | Q8IS90 | VWFA domain-containing protein. | Putative mitochondrial DNA polymerase I protein A. | 0.415 |
| LMJF_14_0260 | POLIB | Q4QFV9 | Q4QGE6 | VWFA domain-containing protein. | Putative mitochondrial DNA polymerase I protein B. | 0.415 |
| LMJF_23_1270 | FEN1 | Q4QB25 | Q4FYU7 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.892 |
| LMJF_23_1270 | LMJF_07_1140 | Q4QB25 | Q4QIH2 | Uncharacterized protein. | Putative methionine-S-sulfoxide reductase. | 0.445 |
| LMJF_23_1270 | LMJF_14_0260 | Q4QB25 | Q4QFV9 | Uncharacterized protein. | VWFA domain-containing protein. | 0.719 |
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