STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_12_0680Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
LMJF_32_1240
Uncharacterized protein.
  
 
 0.936
LMJF_09_0440
Hypothetical tetratricopeptide repeat protein.
  
 
 0.915
LMJF_29_0710
Uncharacterized protein.
  
 
 0.910
LMJF_30_0590
Uncharacterized protein.
  
 
 0.875
LMJF_35_4180
Putative Bardet-Biedl syndrome 1 protein (BBS1-like protein 1).
  
 
 0.797
LMJF_36_2280
Putative Bardet-Biedl syndrome 4 protein homolog (BBS4-like protein 4).
  
 
 0.795
LMJF_24_0140
Ankyrin/TPR repeat protein.
    
 0.705
LMJF_24_1780
Fatty acid transporter protein-like protein.
    
 0.643
LMJF_11_0690
ANK_REP_REGION domain-containing protein.
    
 0.571
LMJF_24_1610
Putative ring-box protein.
    
 0.562
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.