STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_11_0900Putative 60S ribosomal protein L24. (190 aa)    
Predicted Functional Partners:
LMJF_35_0240
60S ribosomal protein L30.
   
 
 0.999
LMJF_35_3280
Putative 60S ribosomal subunit protein L31.
   
 
 0.999
LMJF_35_3760
Putative 60S ribosomal protein L27A/L29.
   
   0.999
LMJF_36_6400
Putative 40S ribosomal protein S8.
   
 
 0.999
LMJF_36_3270
Putative 60S ribosomal protein L22.
   
 
 0.999
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.999
LMJF_32_3130
Putative ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.999
LMJF_33_1870
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.999
LMJF_26_2330
Putative 60S ribosomal protein L35.
   
 
 0.999
LMJF_21_1820
Putative 60S ribosomal protein L37a.
   
 
 0.999
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.