STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_09_0830DEAD/DEAH box helicase-like protein. (776 aa)    
Predicted Functional Partners:
LMJF_29_0030
Ribosomal protein L3-like protein.
   
 
 0.940
CYP10
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  0.933
LMJF_27_2220
Putative ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.929
LMJF_35_5210
G domain-containing protein.
  
 0.929
LMJF_34_3680
50S ribosomal protein L13-like protein.
  
 
 0.928
LMJF_11_1370
TRUD domain-containing protein.
   
   0.926
CYP6
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  0.925
LMJF_14_0780
Uncharacterized protein.
   
   0.924
LMJF_34_3815
Putative ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
   
   0.923
LMJF_16_0160
Putative 50S ribosomal protein L17.
  
   0.923
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.