STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_07_1000RNA binding protein-like protein. (328 aa)    
Predicted Functional Partners:
LmjF11.0410
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.734
LMJF_26_0010
Brix domain containing-like protein.
   
 
 0.698
LMJF_15_1380
Putative nucleolar RNA binding protein.
   
 
 0.691
LMJF_18_1610
Uncharacterized protein.
   
   0.647
LMJF_34_3980
Nucleolar protein family a member-like protein.
   
   0.641
LMJF_10_0210
Putative nucleolar protein.
   
  0.597
LmjF22.0030
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.594
LMJF_21_1760
Putative centromere/microtubule binding protein cbf5.
   
   0.589
LMJF_33_2400
Putative ras-like small GTPases.
   
   0.569
LMJF_25_0620
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.563
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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