Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LMJF_07_1000 | LMJF_10_0210 | Q4QII7 | Q4QHJ7 | RNA binding protein-like protein. | Putative nucleolar protein. | 0.597 |
LMJF_07_1000 | LMJF_15_1380 | Q4QII7 | Q4QF42 | RNA binding protein-like protein. | Putative nucleolar RNA binding protein. | 0.691 |
LMJF_07_1000 | LMJF_18_1610 | Q4QII7 | Q4QDM8 | RNA binding protein-like protein. | Uncharacterized protein. | 0.647 |
LMJF_07_1000 | LMJF_21_1760 | Q4QII7 | Q4QC07 | RNA binding protein-like protein. | Putative centromere/microtubule binding protein cbf5. | 0.589 |
LMJF_07_1000 | LMJF_25_0620 | Q4QII7 | Q4QA33 | RNA binding protein-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.563 |
LMJF_07_1000 | LMJF_26_0010 | Q4QII7 | Q4Q9J0 | RNA binding protein-like protein. | Brix domain containing-like protein. | 0.698 |
LMJF_07_1000 | LMJF_33_2400 | Q4QII7 | Q4Q3U7 | RNA binding protein-like protein. | Putative ras-like small GTPases. | 0.569 |
LMJF_07_1000 | LMJF_34_3980 | Q4QII7 | Q4Q2E3 | RNA binding protein-like protein. | Nucleolar protein family a member-like protein. | 0.641 |
LMJF_07_1000 | LmjF11.0410 | Q4QII7 | Q4QH39 | RNA binding protein-like protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.734 |
LMJF_07_1000 | LmjF22.0030 | Q4QII7 | O97209 | RNA binding protein-like protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.594 |
LMJF_10_0210 | LMJF_07_1000 | Q4QHJ7 | Q4QII7 | Putative nucleolar protein. | RNA binding protein-like protein. | 0.597 |
LMJF_10_0210 | LMJF_15_1380 | Q4QHJ7 | Q4QF42 | Putative nucleolar protein. | Putative nucleolar RNA binding protein. | 0.999 |
LMJF_10_0210 | LMJF_18_1610 | Q4QHJ7 | Q4QDM8 | Putative nucleolar protein. | Uncharacterized protein. | 0.830 |
LMJF_10_0210 | LMJF_21_1760 | Q4QHJ7 | Q4QC07 | Putative nucleolar protein. | Putative centromere/microtubule binding protein cbf5. | 0.995 |
LMJF_10_0210 | LMJF_25_0620 | Q4QHJ7 | Q4QA33 | Putative nucleolar protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.706 |
LMJF_10_0210 | LMJF_26_0010 | Q4QHJ7 | Q4Q9J0 | Putative nucleolar protein. | Brix domain containing-like protein. | 0.851 |
LMJF_10_0210 | LMJF_33_2400 | Q4QHJ7 | Q4Q3U7 | Putative nucleolar protein. | Putative ras-like small GTPases. | 0.879 |
LMJF_10_0210 | LMJF_34_3980 | Q4QHJ7 | Q4Q2E3 | Putative nucleolar protein. | Nucleolar protein family a member-like protein. | 0.992 |
LMJF_10_0210 | LmjF11.0410 | Q4QHJ7 | Q4QH39 | Putative nucleolar protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.866 |
LMJF_10_0210 | LmjF22.0030 | Q4QHJ7 | O97209 | Putative nucleolar protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.834 |
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