STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_04_0820Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. (501 aa)    
Predicted Functional Partners:
LMJF_14_0780
Uncharacterized protein.
  
 
 0.826
LMJF_16_0160
Putative 50S ribosomal protein L17.
    
   0.801
LmjF36.5010
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
   0.794
LMJF_19_0390
Putative 40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.788
LMJF_11_0960
40S ribosomal protein S5A.
  
   0.771
LMJF_15_0950
Putative 40S ribosomal protein S3.
   
 
 0.764
LMJF_28_1010
Putative ribosomal protein S20.
  
   0.764
LMJF_22_0420
Putative 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.764
LMJF_06_0570
Putative 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.764
LMJF_21_1060
Putative 40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
   0.763
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.