STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33800.1[E] COG0006 Xaa-Pro aminopeptidase. (603 aa)    
Predicted Functional Partners:
EED33801.1
Rubredoxin; [C] COG1773 Rubredoxin; Belongs to the rubredoxin family.
     
 0.787
gspK
General secretion pathway protein K; [U] COG3156 Type II secretory pathway, component PulK.
       0.610
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
       0.610
EED33803.1
Putative general secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
       0.610
gspN
Bacterial type II secretion system protein N; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.610
gspJ_1
General secretion pathway protein J; [U] COG4795 Type II secretory pathway, component PulJ.
       0.496
gspI
General secretion pathway protein I; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
       0.496
EED33799.1
Sodium:neurotransmitter symporter; [R] COG0733 Na+-dependent transporters of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.486
gcvT
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase).
  
 0.485
NOR53_906
N-methyl-l-tryptophan oxidase (mtox); [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 
 0.471
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.