STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33382.1[P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (815 aa)    
Predicted Functional Partners:
EED31474.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.787
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.657
EED31208.1
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.616
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.612
NOR53_908
[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.601
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.599
EED31481.1
cytoChrome c oxidase Cbb3-type, subunit I; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.527
NOR53_828
Cupin 2, conserved barrel domain protein; [S] COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
     0.520
EED31901.1
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
   0.501
EED33384.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.473
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.