STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33190.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (1268 aa)    
Predicted Functional Partners:
yaeT
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.924
EED33189.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
   
 0.906
comL
Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.902
EED32439.1
[M] COG3317 Uncharacterized lipoprotein.
   
 
 0.827
EED32498.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.690
EED32609.1
Tetratricopeptide repeat family protein; [S] COG2976 Uncharacterized protein conserved in bacteria.
  
    0.684
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.674
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.636
EED33468.1
Transporter, OMR family; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.625
EED31863.1
TonB system biopolymer transport component; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; overlaps another CDS with the same product name.
 
 
   0.624
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.