STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33989.1[C] COG2010 Cytochrome c, mono- and diheme variants. (210 aa)    
Predicted Functional Partners:
petB
ubiquinol-Cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.998
EED31467.1
[C] COG2863 Cytochrome c553.
 
 0.995
NOR53_631
Putative gluconate 2-dehydrogenase flavoprotein; [E] COG2303 Choline dehydrogenase and related flavoproteins.
 
   0.929
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.846
EED32064.1
[C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.816
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.800
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 0.796
EED31759.1
Cytochrome c-type.
 
 
 0.699
EED32324.1
Putative aralkylamine dehydrogenase heavy chain.
 
 0.686
ccoQ
[O] COG4736 Cbb3-type cytochrome oxidase, subunit 3.
  
 0.668
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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