Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED33860.1[R] COG3107 Putative lipoprotein. (612 aa)    
Predicted Functional Partners:
EED32218.1
[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
 
 
 0.897
EED33862.1
Hypothetical protein; [G] COG0279 Phosphoheptose isomerase.
 
    0.788
zipA
ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.695
lolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
     0.675
EED31584.1
HemY domain protein; [H] COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.669
rsmI
Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.652
EED32201.1
[S] COG3165 Uncharacterized protein conserved in bacteria.
  
    0.642
EED33861.1
Conserved hypothetical protein TIGR00252; [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
  
  
 0.638
EED33892.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.612
EED31876.1
[S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family.
  
     0.567
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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