STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32644.1Porin. (434 aa)    
Predicted Functional Partners:
vacJ
[M] COG2853 Surface lipoprotein.
    
 
 0.904
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 
 0.647
NOR53_873
Two component transcriptional regulator, LuxR family; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.627
EED32642.1
Sensor histidine kinase, putative proline sensor PrlS; [T] COG2205 Osmosensitive K+ channel histidine kinase.
  
     0.585
NOR53_345
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
  
    0.551
NOR53_972
[S] COG4327 Predicted membrane protein.
  
    0.543
NOR53_784
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
   
 
 0.542
EED32033.1
Conserved hypothetical protein.
   
 
 0.540
NOR53_763
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.530
EED31451.1
O-methyltransferase; [R] COG4798 Predicted methyltransferase.
  
     0.528
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.