STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33531.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (138 aa)    
Predicted Functional Partners:
EED33530.1
[O] COG0625 Glutathione S-transferase.
       0.773
EED32489.1
[C] COG0778 Nitroreductase.
  
     0.549
EED31427.1
Peroxisomal multifunctional enzyme type 2; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.538
metC
[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.536
EED31432.1
[I] COG1960 Acyl-CoA dehydrogenases.
  
     0.450
EED32329.1
[I] COG3239 Fatty acid desaturase.
  
     0.450
EED32653.1
2-nitropropane dioxygenase, NPD; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
     0.438
EED31714.1
LytTr DNA-binding domain family protein; [KT] COG3279 Response regulator of the LytR/AlgR family.
  
     0.432
EED31836.1
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
  
     0.420
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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