STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32833.1[V] COG0842 ABC-type multidrug transport system, permease component. (257 aa)    
Predicted Functional Partners:
EED32832.1
Ribosomal protein S16; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.986
EED32834.1
NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent nitrile oxidoreductase); [R] COG0780 Enzyme related to GTP cyclohydrolase I.
     
 0.832
EED31809.1
ATP-binding protein of ABC transporter; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.723
NOR53_980
[V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.723
EED31810.1
Hypothetical protein.
  
 
 0.719
NOR53_245
Hypothetical protein; [V] COG0842 ABC-type multidrug transport system, permease component; ABC-2.
    
  0.592
EED32014.1
Putative ABC-2 type transporter; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
  0.592
EED33243.1
Nitroreductase family protein; [C] COG0778 Nitroreductase.
  
  
 0.585
EED33251.1
Oxidoreductase; [C] COG0778 Nitroreductase.
  
  
 0.566
EED32488.1
Iodotyrosine dehalogenase 1; [C] COG0778 Nitroreductase.
  
  
 0.566
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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