Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32741.1[S] COG3453 Uncharacterized protein conserved in bacteria. (135 aa)    
Predicted Functional Partners:
EED32744.1
[C] COG3658 Cytochrome b.
       0.788
NOR53_829
Nudix hydrolase; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.776
EED32742.1
Amidohydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.773
EED32968.1
Beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.746
sulP
[R] COG2252 Permeases.
 
     0.626
purC
[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family.
       0.582
EED32740.1
Hypothetical protein; [R] COG0730 Predicted permeases.
       0.563
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
 
  
 
0.502
EED34003.1
Sulfide dehydrogenase (flavocytochrome c) flavoprotein chain; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
    
  0.483
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.423
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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