STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33585.1[S] COG5476 Uncharacterized conserved protein. (547 aa)    
Predicted Functional Partners:
EED33586.1
Y4sH; [M] COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).
 
     0.837
EED33172.1
Putative exported protein; [S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.525
EED33568.1
[S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.487
NOR53_767
Conserved domain protein.
       0.473
NOR53_454
[V] COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.425
NOR53_858
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
       0.421
fabH
[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
       0.418
NOR53_726
Haloalkane dehalogenase 2; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.418
NOR53_958
AMP-ligase; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.418
EED31537.1
Amidohydrolase family protein; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
  
     0.408
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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