Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33391.1Ribonuclease Z; [R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III. (375 aa)    
Predicted Functional Partners:
EED33556.1
Conserved hypothetical protein.
 
     0.732
EED33729.1
Dihydroxy-acid dehydratase; [G] COG2017 Galactose mutarotase and related enzymes; Belongs to the glucose-6-phosphate 1-epimerase family.
    
   0.698
dhlA
Haloalkane dehalogenase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.681
NOR53_537
Linalool 8-monooxygenase; [Q] COG2124 Cytochrome P450.
  
     0.569
EED33188.1
Linalool 8-monooxygenase; [Q] COG2124 Cytochrome P450.
  
     0.564
NOR53_928
Antibiotic biosynthesis monooxygenase domain protein; [S] COG1359 Uncharacterized conserved protein.
 
     0.558
EED33217.1
Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase.
 
     0.541
EED31155.1
Putative beta-carotene hydroxylase; [I] COG3239 Fatty acid desaturase.
  
     0.536
EED33132.1
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.461
EED33146.1
[I] COG0183 Acetyl-CoA acetyltransferase.
  
     0.442
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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