STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_11Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator. (241 aa)    
Predicted Functional Partners:
NOR53_327
Putative maleylacetate reductase; [C] COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family.
       0.773
NOR53_132
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.717
NOR53_117
Hypothetical protein; [K] COG1309 Transcriptional regulator; putative transcriptional regulatorTetR/AcrR-family taxon:381666.
  
     0.666
NOR53_128
LAO/AO transport system ATPase; [E] COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
   
   0.541
NOR53_344
Hypothetical protein; [I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; putative Probable methylmalonyl-CoA mutase; EC_number=5.4.99.2.
       0.515
NOR53_216
[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
       0.502
NOR53_142
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.491
NOR53_377
enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.489
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
    
 
 0.441
NOR53_198
[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.413
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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