Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED33941.1Conserved hypothetical protein; [R] COG0457 FOG: TPR repeat. (370 aa)    
Predicted Functional Partners:
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.844
NOR53_844
Transferase hexapeptide repeat containing protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.785
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
  0.728
EED33943.1
Conserved hypothetical protein.
 
     0.679
EED33944.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
   
 0.672
EED33947.1
Conserved hypothetical protein.
 
     0.615
EED33945.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.582
EED33946.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.570
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
     0.542
EED33939.1
Conserved hypothetical protein.
       0.535
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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