STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cepACation efflux pump; [P] COG1230 Co/Zn/Cd efflux system component; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (313 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.839
EED33748.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
       0.618
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
   
 0.521
EED33746.1
Putative TonB-dependent receptor; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.456
EED32323.1
Methylamine utilisation protein MauE.
  
 
 0.455
EED32698.1
[P] COG0474 Cation transport ATPase.
  
 
 0.428
EED33749.1
Conserved hypothetical protein.
       0.423
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.