STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_113Ferritin and Dps; [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family. (156 aa)    
Predicted Functional Partners:
clpS
Sua5/YciO/YrdC/YwlC; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.917
raiA
Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1).
   
    0.735
EED31358.1
OsmC-like protein; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation.
  
  
 0.705
NOR53_48
Hypothetical protein.
       0.631
wrbA
NAD(P)H:quinone oxidoreductase, type IV; [R] COG0655 Multimeric flavodoxin WrbA; Belongs to the WrbA family.
  
  
 0.579
EED32116.1
NADPH-dependent fmn reductase; [R] COG0655 Multimeric flavodoxin WrbA.
  
  
 0.579
EED33133.1
Flavodoxin; [R] COG0655 Multimeric flavodoxin WrbA.
  
  
 0.546
EED32053.1
[S] COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.542
NOR53_210
[C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
       0.529
EED32690.1
BolA family protein; [T] COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
   
    0.523
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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