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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33397.1Transglutaminase family protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (251 aa)    
Predicted Functional Partners:
NOR53_317
Hypothetical protein; [S] COG2308 Uncharacterized conserved protein.
 
    0.817
NOR53_219
[S] COG2307 Uncharacterized protein conserved in bacteria.
 
  
 0.812
NOR53_385
20S proteasome, A/B subunit; [O] COG3484 Predicted proteasome-type protease.
 
    0.753
EED33398.1
Fatty acyl-CoA hydrolase, medium chain (Thioesterase B); [I] COG0657 Esterase/lipase; Belongs to the type-B carboxylesterase/lipase family.
       0.499
icd_2
Isocitrate dehydrogenase, NADP-dependent; [C] COG0538 Isocitrate dehydrogenases.
       0.499
NOR53_276
[S] COG4307 Uncharacterized protein conserved in bacteria.
 
     0.497
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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