Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
erg[I] COG3000 Sterol desaturase. (304 aa)    
Predicted Functional Partners:
EED33573.1
Voltage-gated potassium channel beta subunit; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
       0.737
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
  
 0.719
EED33572.1
Hypothetical protein.
       0.650
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
   
    0.628
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.610
EED31294.1
Conserved hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
   
 0.501
EED33575.1
Dsba oxidoreductase; [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase.
       0.479
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.468
EED31438.1
[Q] COG2124 Cytochrome P450.
  
  0.468
EED32329.1
[I] COG3239 Fatty acid desaturase.
 
 
 0.462
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.