Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED33535.1Hypothetical protein; Putative probable phytanoil-CoA alpha hydroxylase. (295 aa)    
Predicted Functional Partners:
EED33536.1
Amidohydrolase 3; [Q] COG1228 Imidazolonepropionase and related amidohydrolases.
       0.773
EED34037.1
Conserved hypothetical protein.
  
     0.756
NOR53_265
Conserved hypothetical protein.
  
     0.750
EED31615.1
Conserved hypothetical protein.
  
     0.750
NOR53_968
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.705
gspJ_2
General secretion pathway protein J.
  
     0.690
EED31605.1
phytanoyl-CoA dioxygenase (PhyH) family protein; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.679
NOR53_192
Hypothetical protein.
  
     0.655
EED32548.1
Conserved hypothetical protein.
  
     0.652
NOR53_41
Fimbrial assembly protein.
  
     0.642
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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