Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED32964.1Sodium/sulphate symporter; [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases. (494 aa)    
Predicted Functional Partners:
EED32963.1
Conserved hypothetical protein.
       0.769
NOR53_747
[S] COG0432 Uncharacterized conserved protein.
       0.709
EED32965.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.522
NOR53_795
Auxin Efflux Carrier; [R] COG0679 Predicted permeases.
  
    0.512
EED32967.1
Zinc carboxypeptidase family; [E] COG2866 Predicted carboxypeptidase.
 
    0.494
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
  
    0.475
EED32966.1
D-aminoacylase (N-acyl-D-amino-acid deacylase); [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.424
sulP
[R] COG2252 Permeases.
  
 
 0.414
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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