STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32944.1[Q] COG2175 Probable taurine catabolism dioxygenase. (282 aa)    
Predicted Functional Partners:
EED31607.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
  0.612
NOR53_91
Tyrosine decarboxylase 1; [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
 
 0.582
cysH
Phosphoadenosine-phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.578
EED32943.1
Conserved hypothetical protein.
       0.561
EED32302.1
Metal-dependent phosphohydrolase, HD subdomain; [R] COG4341 Predicted HD phosphohydrolase.
 
     0.535
EED34025.1
[R] COG3173 Predicted aminoglycoside phosphotransferase.
  
 
 0.518
EED33709.1
Rieske (2Fe-2S) domain protein; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
  
  0.516
EED33690.1
[Q] COG2175 Probable taurine catabolism dioxygenase.
  
  
 
0.516
EED33259.1
Hydrolase, alpha/beta fold family; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.515
EED33674.1
[I] COG0657 Esterase/lipase.
 
 
 0.500
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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