STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32539.12OG-Fe(II) oxygenase; [R] COG3491 Isopenicillin N synthase and related dioxygenases; Belongs to the iron/ascorbate-dependent oxidoreductase family. (306 aa)    
Predicted Functional Partners:
EED32540.1
Hypothetical protein; [GEPR] COG0477 Permeases of the major facilitator superfamily.
       0.773
argD
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
     
 0.628
xdhB
Xanthine dehydrogenase, molybdopterin binding subunit; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
    
 0.605
EED32097.1
Secreted protein.
     
 0.570
EED32538.1
Hypothetical protein.
       0.568
EED33398.1
Fatty acyl-CoA hydrolase, medium chain (Thioesterase B); [I] COG0657 Esterase/lipase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.495
EED32074.1
Liver carboxylesterase N; [I] COG0657 Esterase/lipase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.495
EED32031.1
Alpha/beta hydrolase fold-3 domain protein; [P] COG2072 Predicted flavoprotein involved in K+ transport.
  
 
  0.446
NOR53_990
Aminotransferase, class I and II; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
  
  0.433
EED33674.1
[I] COG0657 Esterase/lipase.
   
 
 0.432
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.