Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EED33240.1Esterase YbfF; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (260 aa)    
Predicted Functional Partners:
EED33239.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.773
NOR53_18
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
    
 0.686
EED34040.1
Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase.
  
 0.635
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.610
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
  
 
  0.609
dxnG
3-oxoadipate CoA-succinyl transferase, alpha subunit; [I] COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase.
  
 
 0.566
EED31487.1
Putative endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
   
 
 0.552
EED33241.1
Hypothetical protein.
       0.547
EED31333.1
Succinyl-coa:3-ketoacid-coenzyme a transferase subunit b; [I] COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase.
  
 
 0.540
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
   
  0.535
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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