Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33319.1[O] COG3823 Glutamine cyclotransferase. (263 aa)    
Predicted Functional Partners:
mnmC
Oxidoreductase, FAD-binding; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
       0.825
EED33317.1
Hypothetical protein.
       0.780
NOR53_982
Hypothetical protein.
       0.570
NOR53_945
Presequence protease, (Pitrilysin metalloproteinase 1); [R] COG0612 Predicted Zn-dependent peptidases.
       0.535
gltA
[C] COG0372 Citrate synthase; Belongs to the citrate synthase family.
     
  0.416
EED32113.1
[C] COG0372 Citrate synthase.
     
  0.416
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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