STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32994.1[C] COG2086 Electron transfer flavoprotein, beta subunit. (249 aa)    
Predicted Functional Partners:
EED32995.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 0.999
EED34039.1
Putative NADH oxidase; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.987
fadH
2,4-dienoyl-CoA reductase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.987
fadJ
Fatty acid oxidation complex, alpha subunit; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.908
fadB
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.908
EED32397.1
Geranylgeranyl reductase; [C] COG0644 Dehydrogenases (flavoproteins).
  
 
 0.861
sucD
succinyl-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
  
 0.808
EED32227.1
Glutamate synthase small chain; [O] COG0492 Thioredoxin reductase.
  
 
 0.746
EED31778.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
 
 0.692
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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