Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33977.1Serine protease; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (257 aa)    
Predicted Functional Partners:
NOR53_702
Conserved hypothetical protein.
 
     0.888
prsT
Putative PEP-CTERM system TPR-repeat lipoprotein; [R] COG0457 FOG: TPR repeat.
 
 
  0.875
EED33976.1
Low molecular weight phosphotyrosine protein phosphatase; [T] COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.782
prsK
Putative PEP-CTERM system histidine kinase; [T] COG2205 Osmosensitive K+ channel histidine kinase.
  
    0.780
EED33970.1
Conserved hypothetical protein.
 
     0.742
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.741
EED32715.1
Anti-sigma factor MucA; [T] COG3073 Negative regulator of sigma E activity.
  
 
 0.737
EED33931.1
Conserved hypothetical protein.
 
     0.735
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.733
EED33964.1
Polysaccharide chain length determinant protein; [L] COG0419 ATPase involved in DNA repair.
  
     0.726
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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