STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33549.1RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1037 aa)    
Predicted Functional Partners:
EED33548.1
RND family efflux system membrane fusion protein; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.967
EED32216.1
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.884
EED31571.1
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.882
EED32668.1
Multidrug RND transporter, membrane fusion protein (HylD family); [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.878
EED33550.1
Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
       0.737
EED32981.1
[M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.696
EED33101.1
[M] COG0845 Membrane-fusion protein; putative efflux transporterRND family, MFP subunit taxon:351745; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.696
NOR53_848
Efflux transporter, RND family, MFP subunit, AcrA/E family; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.689
NOR53_393
[M] COG0845 Membrane-fusion protein; putative efflux transporterRND family, MFP subunit taxon:351745; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.657
NOR53_784
Type I secretion outer membrane protein, TolC; [MU] COG1538 Outer membrane protein.
 
 0.628
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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