STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33727.1Transmembrane protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (106 aa)    
Predicted Functional Partners:
EED32903.1
[S] COG4805 Uncharacterized protein conserved in bacteria.
  
     0.508
EED33728.1
Amidohydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.495
NOR53_88
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.447
NOR53_297
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.422
EED31115.1
Phospholipase D/Transphosphatidylase; [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
 
     0.417
ccoS
Cytochrome oxidase maturation protein, cbb3-type; [P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.
  
     0.415
EED31089.1
[S] COG3021 Uncharacterized protein conserved in bacteria; protein /y3099/.
 
     0.408
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.