STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33687.1BNR/Asp-box repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (1093 aa)    
Predicted Functional Partners:
EED33688.1
TonB-dependent receptor, putative; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.592
EED32033.1
Conserved hypothetical protein.
  
     0.589
NOR53_592
Conserved hypothetical protein.
  
     0.547
ggt_1
[E] COG0405 Gamma-glutamyltransferase.
       0.529
NOR53_232
Hypothetical protein.
  
     0.528
EED34017.1
[R] COG2366 Protein related to penicillin acylase.
  
     0.488
NOR53_767
Conserved domain protein.
  
     0.450
EED32289.1
Conserved domain protein.
  
     0.446
EED32141.1
Conserved hypothetical protein.
  
     0.434
EED33532.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.414
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.