STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchIMagnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (347 aa)    
Predicted Functional Partners:
chlD
Protoporphyrin IX Magnesium chelatase subunit ChlD; [H] COG1239 Mg-chelatase subunit ChlI.
 
0.998
bchH
Magnesium chelatase, H subunit; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
 
 0.965
bchM
Magnesium protoporphyrin O-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases.
 
 
 0.898
EED32395.1
Chlorophyll synthase, (Polyprenyltransferase); [O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
  
 0.855
EED32519.1
[R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 0.853
EED33196.1
Von Willebrand factor, type A; [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 0.853
EED32366.1
Putative magnesium chelatase accessory protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
    0.848
EED32397.1
Geranylgeranyl reductase; [C] COG0644 Dehydrogenases (flavoproteins).
 
  
 0.841
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
 
  
 0.801
EED32367.1
[Q] COG1233 Phytoene dehydrogenase and related proteins.
  
 
 0.658
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.