Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EED33258.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (410 aa)    
Predicted Functional Partners:
EED33259.1
Hydrolase, alpha/beta fold family; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.773
NOR53_712
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.772
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
   0.750
EED32644.1
Porin.
  
 0.747
EED33189.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.724
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.712
EED33597.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.708
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
  
     0.697
EED31451.1
O-methyltransferase; [R] COG4798 Predicted methyltransferase.
  
     0.687
EED33993.1
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.681
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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