Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EED33920.1Pgap1 family protein; [R] COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold. (223 aa)    
Predicted Functional Partners:
EED31771.1
Hypothetical protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); male sterility C-terminal domain.
 
  
 0.766
EED31665.1
Acyltransferase, ws/dgat/mgat subfamily protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.763
NOR53_545
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.754
atfA
Acyltransferase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.713
EED33510.1
AMP-binding protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.631
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
     
  0.596
EED32493.1
Hypothetical protein; [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
  
  0.573
EED31367.1
Lipase family protein; [I] COG3675 Predicted lipase.
     
 0.566
EED32669.1
Putative lipase 4 (Triacylglycerol lipase 4); [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
  
  0.561
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
     
  0.539
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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