Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED34025.1[R] COG3173 Predicted aminoglycoside phosphotransferase. (474 aa)    
Predicted Functional Partners:
EED34026.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
  0.856
EED33423.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
  0.754
EED31429.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
  0.736
EED33146.1
[I] COG0183 Acetyl-CoA acetyltransferase.
  
  0.589
fadJ
Fatty acid oxidation complex, alpha subunit; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.573
fadB
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.573
NOR53_733
Alcohol dehydrogenase, zinc-binding domain protein; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
    0.556
EED31425.1
Alcohol dehydrogenase, zinc-binding domain protein; [R] COG1064 Zn-dependent alcohol dehydrogenases.
 
  0.530
EED31069.1
Alcohol dehydrogenase, zinc-containing; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
    0.528
NOR53_753
[Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; putative uncharacterized domain 1.
  
     0.528
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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