Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EED34024.1Zn-dependent enzyme, member of deacylase/carboxypeptidase family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (308 aa)    
Predicted Functional Partners:
NOR53_608
Conserved hypothetical protein.
  
     0.673
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
  0.566
putA_1
Bifunctional PutA protein; [C] COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase.
     
  0.537
EED31787.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.493
EED34023.1
Conserved hypothetical protein.
       0.489
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.417
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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