Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33246.1Hypothetical protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins; helix-turn-helix, AraC type. (334 aa)    
Predicted Functional Partners:
EED31455.1
Transcriptional regulator, AraC family; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
   0.630
NOR53_883
[K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.570
EED32847.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.567
fabB
[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.549
EED33247.1
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.542
EED31139.1
[K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.540
ada
ADA regulatory protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.530
NOR53_254
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.496
EED33367.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.489
EED33244.1
Methyltransferase, FkbM family; [QR] COG0500 SAM-dependent methyltransferases.
       0.469
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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