Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hyuB[EQ] COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit. (629 aa)    
Predicted Functional Partners:
hyuA
[EQ] COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.999
NOR53_493
Hydantoinase/oxoprolinase family protein; [EQ] COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
 0.972
putA_1
Bifunctional PutA protein; [C] COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase.
    
  0.748
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
  0.739
EED32472.1
hydroxymethylglutaryl-CoA lyase; [E] COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
     0.659
EED32471.1
L-carnitine dehydratase/bile acid-inducible protein F; [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.605
EED33192.1
Bacterial NAD-glutamate dehydrogenase superfamily protein; [E] COG2902 NAD-specific glutamate dehydrogenase.
  
  
  0.584
NOR53_760
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
  
     0.581
EED32663.1
Conserved hypothetical protein TIGR00370; [E] COG2049 Allophanate hydrolase subunit 1.
    
  0.542
NOR53_756
Regulator of kinase autophosphorylation inhibitor; [E] COG1984 Allophanate hydrolase subunit 2.
    
  0.541
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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