STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrbANAD(P)H:quinone oxidoreductase, type IV; [R] COG0655 Multimeric flavodoxin WrbA; Belongs to the WrbA family. (199 aa)    
Predicted Functional Partners:
NOR53_113
Ferritin and Dps; [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.579
NOR53_843
Conserved hypothetical protein; [S] COG3308 Predicted membrane protein.
       0.553
EED32428.1
tRNA-processing ribonuclease BN; [S] COG1295 Predicted membrane protein.
       0.549
EED32053.1
[S] COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.521
EED31781.1
General stress protein 14; [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.462
sppA
Signal peptide peptidase SppA, 67K type; [OU] COG0616 Periplasmic serine proteases (ClpP class).
       0.433
cbpA
curved-DNA-binding protein, DnaJ family; [O] COG2214 DnaJ-class molecular chaperone.
   
  
 0.413
EED31294.1
Conserved hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
    
  0.411
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.