STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33218.1Peptidase M20; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. (396 aa)    
Predicted Functional Partners:
EED33216.1
Amidohydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
 
  
  0.779
EED33219.1
Conserved hypothetical protein.
       0.775
argD
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.740
argA_1
Amino-acid N-acetyltransferase; [E] COG1246 N-acetylglutamate synthase and related acetyltransferases; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.710
EED33222.1
HesB/YadR/YfhF.
 
     0.576
EED33221.1
Peptidase M16 inactive domain family protein; [R] COG0612 Predicted Zn-dependent peptidases.
     
 0.543
NOR53_714
Hypothetical protein; [R] COG0612 Predicted Zn-dependent peptidases; putative peptidaseM16 family.
     
 0.543
EED33223.1
Diguanylate cyclase with PAS/PAC sensor; [T] COG2199 FOG: GGDEF domain.
       0.518
EED31694.1
[F] COG0167 Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family.
  
 0.486
NOR53_617
Putative esterase.
  
     0.484
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.