STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilEFimbrial protein PilE (MS11 antigen); [NU] COG4968 Tfp pilus assembly protein PilE; Belongs to the N-Me-Phe pilin family. (167 aa)    
Predicted Functional Partners:
pilY
[NU] COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.869
NOR53_71
[NU] COG4966 Tfp pilus assembly protein PilW.
 
  
 0.835
pilV
[NU] COG4967 Tfp pilus assembly protein PilV.
 
  
 0.811
NOR53_209
[NU] COG4726 Tfp pilus assembly protein PilX.
  
  
 0.798
pilD
Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.771
EED33837.1
Type IV pilus biogenesis protein PilC; [I] COG0657 Esterase/lipase.
 
   
 0.734
EED32219.1
[NU] COG4972 Tfp pilus assembly protein, ATPase PilM.
 
   
 0.675
EED31905.1
Twitching motility protein PilT; [NU] COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
   
 0.644
EED32223.1
Type IV pilus secretin PilQ; [U] COG4964 Flp pilus assembly protein, secretin CpaC.
 
     0.611
pilB
Type IV-A pilus assembly ATPase PilB; [NU] COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
   
 0.605
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.